Presented at Antibody Engineering & Therapeutics US 2025: Overcoming ncAA Production Bottlenecks: High-titer Antibody Expression with 100% pAzF Incorporation at Scale and Minimal Host Toxicity

December 14, 2025

ABSTRACT:

A platform-based approach leveraging the Pfenex Expression Technology® was developed for implementing screening through lead optimization of novel ADCs.

As an example of the workflow, an Anti-GPCR VHH therapeutic candidate modified to include a single ncAA (pAzF) substitution was developed.

The site of ncAA incorporation was determined through rationale design using hydrogen-deuterium exchange (HDX) mass spectrometry

pAzF feed strategies were evaluated at the 2L fermentation scale, identifying a continuous feed strategy that achieved very similar titers to the canonical VHH (~15 g/ L)

Higher pAzF concentrations were shown to be toxic, likely due to off-target amber suppression

Peptide mapping of Y84pAzF VHH showed 100% pAzF incorporation. Intact mass spectrometry showed 100% click reaction conversion

Binding activity was not affected by conjugation

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